PROJECT #18101 RESEARCH FOR CANCER
FOLDING PERFORMANCE PROFILE

PROJECT SUMMARY

Here we are testing what has long been the dream on F@h --- adaptive sampling algorithms guided by experimental data. The system used is caspase-7, one of a family of important mediators of apoptosis, and hence of interest for cancer drug design. We have collected experimental hydrogen-deuterium exchange (HDX) data (which informs on the extent of fluctuations of each region of the protein) in both apo (just protein) and holo (protein with another peptide bound) states, and are exploring adaptive sampling algorithms to reproduce the HDX data in each state separately, as well as the differences ('shielding') between them. All data is being made publicly available, and insight into the algorithmic methodology will be published.

This is a project run by Roivant Sciences (formerly Silicon Therapeutics) as was officially announced in this press release: https://foldingathome.org/2021/04/20/maximizing-the-impact-of-foldinghome-by-engaging-industry-collaborators/ 

 

PROJECT INFO

Manager(s): Rafal Wiewiora

Institution: Roivant Sciences (Silicon Therapeutics)

Project URL: roivant.com

PROJECT WORK UNIT SUMMARY

Atoms: 86,257

Core: OPENMM_22

Status: Public

PROJECT FOLDING PPD AVERAGES BY GPU

PPDDB data as of Friday, 23 July 2021 12:13:38

Rank
Project
Model Name
Folding@Home Identifier
Make
Brand
GPU
Model
PPD
Average
Points WU
Average
WUs Day
Average
WU Time
Average
1 GeForce RTX 3090
GA102 [GeForce RTX 3090]
Nvidia GA102 5,529,878 247,222 22.37 1 hrs 4 mins
2 GeForce RTX 3080 Ti
GA102 [GeForce RTX 3080 Ti]
Nvidia GA102 5,061,108 234,310 21.60 1 hrs 7 mins
3 GeForce RTX 3080
GA102 [GeForce RTX 3080]
Nvidia GA102 4,208,018 226,388 18.59 1 hrs 17 mins
4 GeForce RTX 2080 Ti Rev. A
TU102 [GeForce RTX 2080 Ti Rev. A] M 13448
Nvidia TU102 3,705,894 216,099 17.15 1 hrs 24 mins
5 GeForce RTX 3070
GA104 [GeForce RTX 3070]
Nvidia GA104 2,632,562 193,874 13.58 2 hrs 46 mins
6 TITAN Xp
GP102 [TITAN Xp] 12150
Nvidia GP102 2,413,721 187,908 12.85 2 hrs 52 mins
7 GeForce RTX 2080 Rev. A
TU104 [GeForce RTX 2080 Rev. A] 10068
Nvidia TU104 2,052,948 178,430 11.51 2 hrs 5 mins
8 GeForce RTX 3060 Ti
GA104 [GeForce RTX 3060 Ti]
Nvidia GA104 2,043,847 178,283 11.46 2 hrs 6 mins
9 GeForce GTX 1080 Ti
GP102 [GeForce GTX 1080 Ti] 11380
Nvidia GP102 2,027,028 177,498 11.42 2 hrs 6 mins
10 GeForce RTX 2080
TU104 [GeForce RTX 2080]
Nvidia TU104 1,984,592 173,298 11.45 2 hrs 6 mins
11 GeForce RTX 2070 Rev. A
TU106 [GeForce RTX 2070 Rev. A] M 7465
Nvidia TU106 1,922,443 174,657 11.01 2 hrs 11 mins
12 Radeon RX 6800/6800 XT / 6900 XT
Navi 21 [Radeon RX 6800/6800 XT / 6900 XT]
AMD Navi 21 1,904,502 173,819 10.96 2 hrs 11 mins
13 GeForce RTX 2060 Super
TU106 [GeForce RTX 2060 SUPER]
Nvidia TU106 1,742,385 169,242 10.30 2 hrs 20 mins
14 Radeon RX 6700/6700 XT / 6800M
Navi 22 [Radeon RX 6700/6700 XT / 6800M]
AMD Navi 22 1,706,350 168,327 10.14 2 hrs 22 mins
15 Radeon RX 5600 OEM/5600 XT/5700/5700 XT
Navi 10 [Radeon RX 5600 OEM/5600 XT/5700/5700 XT]
AMD Navi 10 1,295,183 152,836 8.47 3 hrs 50 mins
16 GeForce RTX 2060 Mobile
TU106M [GeForce RTX 2060 Mobile]
Nvidia TU106M 1,129,436 146,819 7.69 3 hrs 7 mins
17 GeForce GTX 1660 SUPER
TU116 [GeForce GTX 1660 SUPER]
Nvidia TU116 961,355 134,378 7.15 3 hrs 21 mins
18 Radeon RX Vega 56/64
Vega 10 XL/XT [Radeon RX Vega 56/64]
AMD Vega 10 XL/XT 876,872 123,146 7.12 3 hrs 22 mins
19 GeForce GTX 1060 6GB
GP106 [GeForce GTX 1060 6GB] 4372
Nvidia GP106 678,037 123,378 5.50 4 hrs 22 mins
20 GeForce GTX 970
GM204 [GeForce GTX 970] 3494
Nvidia GM204 598,053 118,436 5.05 5 hrs 45 mins
21 P104-100
GP104 [P104-100]
Nvidia GP104 473,118 109,567 4.32 6 hrs 33 mins
22 GeForce GTX 1060 3GB
GP106 [GeForce GTX 1060 3GB] 3935
Nvidia GP106 469,345 108,887 4.31 6 hrs 34 mins
23 Radeon RX 470/480/570/580/590
Ellesmere XT [Radeon RX 470/480/570/580/590]
AMD Ellesmere XT 401,869 103,643 3.88 6 hrs 11 mins
24 GeForce GTX 1650 Mobile / Max-Q
TU117M [GeForce GTX 1650 Mobile / Max-Q]
Nvidia TU117M 147,548 43,264 3.41 7 hrs 2 mins
25 Radeon RX Vega gfx902
raven [Radeon RX Vega gfx902]
AMD raven 51,420 45,570 1.13 21 hrs 16 mins

PROJECT FOLDING PPD AVERAGES BY CPU BETA

PPDDB data as of Friday, 23 July 2021 12:13:38

Rank
Project
CPU Model Logical
Processors (LP)
PPD-PLP
AVG PPD per 1 LP
ALL LP-PPD
(Estimated)
Make