Research section Research projects and references

Research: CANCER Folding Project #15346

Project #15346 overview

Project Summary AI Beta

Lanthipeptides are powerful medicines made by bacteria. One enzyme, ProcM, can make many different types. Scientists want to understand how ProcM chooses where to build these medicines at the atomic level using computer simulations.
Automated summary; simplified and may not be fully accurate.

Project team

Manager(s)
Miko Miwa
Institution
UIUC

Work unit

Atoms
157,997
Core
0x28
Status
Beta

No related projects listed.

Source material

Official Project Description

Lanthipeptides are a class of ribosomally synthesized and post-translationally modified peptides (RiPPs) produced from precursor peptides through dehydration and cyclization reactions.

They exhibit a broad range of bioactivities, including anticancer, antimicrobial, antiviral, and antiallodynic effects.

ProcM, a class II lanthipeptide synthetase, is notable for its high substrate tolerance.

Remarkably, this single enzyme can catalyze the cyclization of a diverse array of substrates with high fidelity—an ability that has been extensively leveraged in the bioengineering of novel lanthipeptides.

Despite this, the molecular mechanism by which ProcM determines the site-selectivity of its substrates remains unclear.

In this study, we aim to perform atomic-level molecular dynamics (MD) simulations of the wild-type (WT) and Variant ProcM–ProcA3.3 complexes to investigate the basis of ProcM's site-selectivity.

Performance data

Hardware Performance for Project 15346

Compare community-sampled Folding@Home output for the GPUs and CPUs processing this project.

Data as of Friday, 13 November 2026 03:31:06

GPU PPD Averages

Rank
Project
Model Name
Folding@Home Identifier
Make
Brand
GPU
Model
PPD
Average
Points WU
Average
WUs Day
Average
WU Time
Average
1 GeForce RTX 4070 SUPER
AD104 [GeForce RTX 4070 SUPER]
Nvidia AD104 12,775,816 72,263 176.80 0 hrs 8 mins
2 GeForce RTX 5060
GB206 [GeForce RTX 5060]
Nvidia GB206 6,125,498 72,263 84.77 0 hrs 17 mins
3 Intel Arc Pro B70
Battlemage G31 [Intel Arc Pro B70]
Intel Battlemage G31 5,843,249 72,263 80.86 0 hrs 18 mins
4 GeForce RTX 3070
GA104 [GeForce RTX 3070]
Nvidia GA104 4,565,234 72,263 63.18 0 hrs 23 mins
5 Radeon RX 9060(XT)
Navi 44 [Radeon RX 9060(XT)]
AMD Navi 44 3,649,287 72,263 50.50 0 hrs 29 mins
6 GeForce RTX 4060
AD107 [GeForce RTX 4060]
Nvidia AD107 3,613,709 72,263 50.01 0 hrs 29 mins