Research section Research projects and references

Research: PROTEIN-SIMULATION Folding Project #19502

Project #19502 overview

Project Summary AI Beta

The project relates to using artificial intelligence (AI) to understand how proteins move and interact. This could help us design new medicines and predict how viruses change. Scientists will create a large dataset of proteins to train powerful AI models.
Automated summary; simplified and may not be fully accurate.

Project team

Manager(s)
Andreas Krämer
Institution
Freie Universität Berlin

Work unit

Atoms
34,860
Core
0x22
Status
Public
Source material

Official Project Description

Summary The AI4Science Group at Freie Universität Berlin develops machine learning methods for physical sciences, with a focus on physics-constrained learning algorithms, complex dynamical systems analysis, efficient generative learning methods for statistical mechanics, and highly accurate machine learning methods for quantum mechanics.

They are an interdisciplinary team of mathematicians, chemists, physicists, and computer scientists. Details The primary objective of this project is to develop large-scale artificial intelligence (AI) models to efficiently sample protein dynamics and predict the stability of folded states and protein-protein interactions.

Being able to do this efficiently and accurately would be a game-changer for the prediction of virus mutants and the design of therapies for various diseases.

AI techniques have demonstrated exceptional performance on benchmark systems and have the potential to vastly speed up computations yet maintain comparable levels of accuracy as classical molecular dynamics simulations. The project aims to generate a comprehensive dataset of small protein systems that will provide the necessary information for creating the next generation of AI models for protein simulations.

We will collaborate with the Clementi Group at Freie Universität Berlin to achieve this goal.

Performance data

Hardware Performance for Project 19502

Compare community-sampled Folding@Home output for the GPUs and CPUs processing this project.

Data as of Sunday, 02 August 2026 21:48:27

GPU PPD Averages

Rank
Project
Model Name
Folding@Home Identifier
Make
Brand
GPU
Model
PPD
Average
Points WU
Average
WUs Day
Average
WU Time
Average
1 TITAN V
GV100 [TITAN V] M 12288
Nvidia GV100 3,133,257 137,853 22.73 1 hrs 3 mins
2 GeForce RTX 2070
TU106 [GeForce RTX 2070]
Nvidia TU106 3,048,155 135,865 22.44 1 hrs 4 mins
3 GeForce RTX 2060 Super
TU106 [GeForce RTX 2060 SUPER]
Nvidia TU106 2,407,482 126,650 19.01 1 hrs 16 mins
4 GeForce RTX 2060 12GB
TU106 [GeForce RTX 2060 12GB]
Nvidia TU106 2,222,162 122,726 18.11 1 hrs 20 mins
5 GeForce RTX 2060
TU104 [GeForce RTX 2060]
Nvidia TU104 1,837,348 115,637 15.89 1 hrs 31 mins
6 GeForce GTX 1080 Ti
GP102 [GeForce GTX 1080 Ti] 11380
Nvidia GP102 1,834,037 98,558 18.61 1 hrs 17 mins
7 GeForce RTX 2060
TU106 [Geforce RTX 2060]
Nvidia TU106 1,802,908 114,964 15.68 1 hrs 32 mins
8 GeForce GTX 1070 Ti
GP104 [GeForce GTX 1070 Ti] 8186
Nvidia GP104 1,671,051 111,723 14.96 1 hrs 36 mins
9 GeForce RTX 3050 8GB
GA107 [GeForce RTX 3050 8GB]
Nvidia GA107 1,531,357 108,278 14.14 1 hrs 42 mins
10 GeForce GTX 1080
GP104 [GeForce GTX 1080] 8873
Nvidia GP104 1,416,682 98,858 14.33 1 hrs 40 mins
11 GeForce GTX 980 Ti
GM200 [GeForce GTX 980 Ti] 5632
Nvidia GM200 1,386,970 104,938 13.22 1 hrs 49 mins
12 GeForce RTX 3060 Mobile / Max-Q
GA106M [GeForce RTX 3060 Mobile / Max-Q]
Nvidia GA106M 1,316,637 101,445 12.98 1 hrs 51 mins
13 P104-100
GP104 [P104-100]
Nvidia GP104 1,314,131 102,984 12.76 1 hrs 53 mins
14 GeForce GTX 1660 SUPER
TU116 [GeForce GTX 1660 SUPER]
Nvidia TU116 1,222,549 99,277 12.31 1 hrs 57 mins
15 GeForce GTX 1070
GP104 [GeForce GTX 1070] 6463
Nvidia GP104 1,168,960 97,707 11.96 2 hrs 0 mins
16 P106-100
GP106 [P106-100]
Nvidia GP106 916,537 91,429 10.02 2 hrs 24 mins
17 GeForce GTX 1060 3GB
GP106 [GeForce GTX 1060 3GB] 3935
Nvidia GP106 901,342 91,103 9.89 2 hrs 26 mins
18 Tesla P4
GP104GL [Tesla P4] 5704
Nvidia GP104GL 831,598 88,786 9.37 2 hrs 34 mins
19 GeForce GTX 1650 SUPER
TU116 [GeForce GTX 1650 SUPER]
Nvidia TU116 701,295 74,948 9.36 2 hrs 34 mins
20 GeForce GTX 1060 6GB
GP106 [GeForce GTX 1060 6GB] 4372
Nvidia GP106 668,002 77,601 8.61 2 hrs 47 mins
21 GeForce GTX 980
GM204 [GeForce GTX 980] 4612
Nvidia GM204 623,319 80,544 7.74 3 hrs 6 mins
22 GeForce GTX 970
GM204 [GeForce GTX 970] 3494
Nvidia GM204 620,044 78,633 7.89 3 hrs 3 mins
23 GeForce GTX 1650
TU116 [GeForce GTX 1650] 3091
Nvidia TU116 616,759 80,440 7.67 3 hrs 8 mins
24 GeForce GTX 1650 Ti Mobile
TU117M [GeForce GTX 1650 Ti Mobile]
Nvidia TU117M 594,008 79,631 7.46 3 hrs 13 mins
25 Quadro P2200
GP106GL [Quadro P2200]
Nvidia GP106GL 588,088 78,980 7.45 3 hrs 13 mins
26 GeForce GTX 1650
TU117 [GeForce GTX 1650]
Nvidia TU117 558,730 77,570 7.20 3 hrs 20 mins
27 Quadro T1000 Mobile
TU117GLM [Quadro T1000 Mobile]
Nvidia TU117GLM 472,897 73,422 6.44 3 hrs 44 mins
28 GeForce GTX 1050 Ti
GP107 [GeForce GTX 1050 Ti] 2138
Nvidia GP107 411,557 70,610 5.83 4 hrs 7 mins
29 Quadro M4000
GM204GL [Quadro M4000]
Nvidia GM204GL 342,036 66,107 5.17 4 hrs 38 mins
30 GeForce GTX 960
GM206 [GeForce GTX 960] 2308
Nvidia GM206 324,428 63,256 5.13 4 hrs 41 mins
31 GeForce GTX 1050 3 GB Max-Q
GP107M [GeForce GTX 1050 3 GB Max-Q]
Nvidia GP107M 319,497 65,024 4.91 4 hrs 53 mins
32 GeForce GTX 950
GM206 [GeForce GTX 950] 1572
Nvidia GM206 299,768 63,087 4.75 5 hrs 3 mins
33 GeForce GTX 1050 LP
GP107 [GeForce GTX 1050 LP] 1862
Nvidia GP107 243,301 61,293 3.97 6 hrs 3 mins
34 Quadro P620
GP107GL [Quadro P620]
Nvidia GP107GL 187,712 53,887 3.48 6 hrs 53 mins
35 GeForce GTX 750 Ti
GM107 [GeForce GTX 750 Ti] 1389
Nvidia GM107 177,628 52,668 3.37 7 hrs 7 mins
36 Quadro K1200
GM107GL [Quadro K1200]
Nvidia GM107GL 105,306 44,430 2.37 10 hrs 8 mins
37 Vega Mobile 5000 series APU
Cezanne [Vega Mobile 5000 series APU]
AMD Cezanne 66,381 38,509 1.72 13 hrs 55 mins
38 GeForce GT 1030
GP108 [GeForce GT 1030]
Nvidia GP108 47,330 30,422 1.56 15 hrs 26 mins
39 R7 370/R9 270X/370X
Curacao XT/Trinidad XT [R7 370/R9 270X/370X]
AMD Curacao XT/Trinidad XT 15,837 24,438 0.65 37 hrs 2 mins