Research section Research projects and references

Research: PLANT-LIPID-BIOSYNTHESIS-MUTANTS Folding Project #15704

Project #15704 overview

Project Summary AI Beta

This project studies a plant gene (AtWRI1) that controls oil production. Scientists want to find even better versions of this gene to make plants grow more oil for biofuel. They use computer simulations to test different gene versions and speed up the process.
Automated summary; simplified and may not be fully accurate.

Project team

Manager(s)
Yuming Zhou
Institution
University of Illinois Urbana-Champaign

Work unit

Atoms
73,672
Core
0x27
Status
Public
Source material

Official Project Description

AtWRI1 is a central transcriptional regulator of lipid biosynthesis in plants.

It acts as a key switch that drives fatty acid production and triacylglycerol accumulation by binding to the AW-box motif upstream of genes involved in late glycolysis and fatty acid synthesis.

Recent work has shown that the W74R mutation can enhance DNA binding and significantly increase oil content, motivating our goal of identifying even more effective mutants.

Although current plant molecular experiments are relatively accurate, they are often slower than comparable studies in animal or human systems.

To enable large-scale mutant screening in a more time-efficient manner, we use molecular dynamics simulations as a computational proxy for DNA-binding behavior associated with lipid production.

Ultimately, this project aims to guide the design of higher-yielding bioenergy crops, contributing to improved sustainability and energy security.

Performance data

Hardware Performance for Project 15704

Compare community-sampled Folding@Home output for the GPUs and CPUs processing this project.

Data as of Wednesday, 04 November 2026 00:29:13

GPU PPD Averages

Rank
Project
Model Name
Folding@Home Identifier
Make
Brand
GPU
Model
PPD
Average
Points WU
Average
WUs Day
Average
WU Time
Average
1 Radeon RX 7900XT/XTX/GRE
Navi 31 [Radeon RX 7900XT/XTX/GRE]
AMD Navi 31 4,173,235 19,016 219.46 0 hrs 7 mins
2 Radeon RX 6800(XT)/6900XT
Navi 21 [Radeon RX 6800(XT)/6900XT]
AMD Navi 21 4,070,271 19,016 214.04 0 hrs 7 mins
3 Radeon RX 6950 XT
Navi 21 [Radeon RX 6950 XT]
AMD Navi 21 3,908,708 19,016 205.55 0 hrs 7 mins
4 Radeon RX 9070(XT)
Navi 48 [Radeon RX 9070(XT)]
AMD Navi 48 3,813,038 19,016 200.52 0 hrs 7 mins
5 GeForce RTX 2060 Super
TU106 [GeForce RTX 2060 SUPER]
Nvidia TU106 2,275,667 100,261 22.70 1 hrs 3 mins
6 Radeon RX 9060(XT)
Navi 44 [Radeon RX 9060(XT)]
AMD Navi 44 2,204,595 19,016 115.93 0 hrs 12 mins
7 Radeon RX 6700(XT)/6800M
Navi 22 XT-XL [Radeon RX 6700(XT)/6800M]
AMD Navi 22 XT-XL 2,166,682 19,016 113.94 0 hrs 13 mins
8 GeForce RTX 2060
TU106 [Geforce RTX 2060]
Nvidia TU106 1,953,458 101,617 19.22 1 hrs 15 mins
9 GeForce GTX 1080
GP104 [GeForce GTX 1080] 8873
Nvidia GP104 1,702,989 97,002 17.56 1 hrs 22 mins
10 GeForce RTX 3060 Mobile / Max-Q
GA106M [GeForce RTX 3060 Mobile / Max-Q]
Nvidia GA106M 1,510,223 91,764 16.46 1 hrs 27 mins
11 GeForce GTX 1070
GP104 [GeForce GTX 1070] 6463
Nvidia GP104 1,125,257 32,105 35.05 0 hrs 41 mins
12 GeForce GTX 1660
TU116 [GeForce GTX 1660]
Nvidia TU116 1,045,652 19,016 54.99 0 hrs 26 mins
13 GeForce GTX 1050 LP
GP107 [GeForce GTX 1050 LP] 1862
Nvidia GP107 385,490 19,016 20.27 1 hrs 11 mins
14 Radeon RX 6400/6500XT
Navi 24 [Radeon RX 6400/6500XT]
AMD Navi 24 322,533 55,524 5.81 4 hrs 8 mins
15 Quadro P1000
GP107GL [Quadro P1000]
Nvidia GP107GL 247,486 50,987 4.85 4 hrs 57 mins
16 GeForce GTX 1660 SUPER
TU116 [GeForce GTX 1660 SUPER]
Nvidia TU116 245,735 24,803 9.91 2 hrs 25 mins
17 GeForce GTX 1070 Mobile
GP104BM [GeForce GTX 1070 Mobile] 6463
Nvidia GP104BM 221,414 19,016 11.64 2 hrs 4 mins
18 Instinct MI300A
Aqua Vanjaram [Instinct MI300A]
Unknown Aqua Vanjaram 213,678 19,016 11.24 2 hrs 8 mins
19 GeForce GTX 1050 Ti
GP107 [GeForce GTX 1050 Ti] 2138
Nvidia GP107 164,212 25,664 6.40 3 hrs 45 mins
20 GeForce GT 1030
GP108 [GeForce GT 1030]
Nvidia GP108 142,155 38,795 3.66 6 hrs 33 mins